Experiment Factory :heart: LabJS
If you want to make your own experiment interactively, LabJS can help you! If you want to then build and deploy your experiments into reproducible experiment containers, you can use the expfactory builder, demonstrated here to empower you! This repository is an example of that, with the stroop task (exported from LabJS) built and deployed to Docker Hub via this circle CI workflow:
Design Your Experiment
The first thing you likely want to do is to design your experiment. Take a look at the getting started section of the main README.md file of the LabJS Github repository. There is ample documentation about a started kit, along with a tutorial to build your first experiment. You will (currently) need to use the LabJS beta interface and eventually the LabJS builder interface to design your experiment, and when you finish, the Experiment Factory (v3.0) is an export option:
This will export a zip file of all the files needed to plug into the Experiment Factory! To help you learn and get started, we are providing an example export (stoop-task-export.zip) of a Stroop task in the tutorial repository. At this point, the only thing we need to do is:
- Clone this repository
- Move the experiment into the “experiments” folder
- Connect!
Let’s do this!
0. Clone the repository
The repository has a hidden folder, .circleci with the build and deploy setup that you need. The easiest way to get this to your computer is to fork it to your Github account, and then clone:
git clone https://github.com/<username>/builder-labjs
cd builder-labjs
1. Export and Extract
At this point you would design your experiment in LabJS, and export it as shown in the instructions above. We’ve done this for you, for a stroop task, and we will show you how we did it. Given an exported experiment (stroop-task-export.zip) in the present working directory, let’s first extract the exported experiment. It will dump the required files into a folder in the present working directory.
unzip stroop-task-export.zip
ls
stroop-task
Take a look at the config.json
in the folder. It will provide metadata exported about your experiment, and you can customize this if needed before building your container.
cat stroop-task/config.json
{
"name": "Stroop task",
"exp_id": "stroop-task",
"url": "https://github.com/felixhenninger/lab.js/examples/",
"description": "An implementation of the classic paradigm introduced by Stroop (1935).",
"contributors": [
"Felix Henninger <mailbox@felixhenninger.com> (http://felixhenninger.com)"
],
"template": "lab.js",
"instructions": "",
"time": 5
}
Finally, we can move the entire thing into the “experiments” folder for it to be discovered by the builder.
mkdir -p experiments
mv stroop-task experiments/
If you wanted to add additional experiments from the library
you could add a single line (space separated) to an experiments.txt file in the main folder. For example, if I wanted to install “test-task” and “tower-of-london” from the library I would have a file called experiments.txt
with:
test-task tower-of-london
2. Build
We now will recruit the builder to turn our folder into a reproducible experiment container! Unlike the instructions in expfactory-labjs, we don’t need to do any building or use of Docker locally. We just need to:
- Create a container repository on Docker Hub to correspond to the name you want to build
- Connect the repository to Circle Ci, and
- Commit and push the code to Github
- Add the following environment variables to your CircleCI encrypted environment variables under the project settings:
4.1.
CONTAINER_NAME
should refer to the container you want to deploy to on Docker Hub. This is usually a/ and in the example here, we used `vanessa/expfactory-stroop`. 4.2. `DOCKER_USER` and `DOCKER_PASS` should coincide with your Docker credentials.
Once you’ve done those steps, that’s it! The container will be built and pushed to Docker Hub on each commit.
3. Run
Once your container is deployed, you can run and use it! There are many ways to do that. Here is a simple headless start:
docker run -d -p 80:80 vanessa/expfactory-stroop start
and you will see the familiar interface to choose your task and get started. Have fun!